The Rise of Aquaculture
Aquaculture, or the farming of aquatic species like fish, shellfish, and plants, has seen remarkable growth in recent decades. As wild fish stocks have declined due to overfishing and environmental pressures, aquaculture now provides over half of the seafood consumed globally. The major species raised through aquaculture include salmon, tilapia, catfish, shrimp, oysters, and mussels.
In the United States, the agriculture and food sectors, including aquaculture, contributed 5.5% to the gross domestic product and employed over 10% of the workforce. While capture fisheries production has remained relatively flat, aquaculture production has grown steadily to meet rising seafood demand from American consumers. Farmed seafood now accounts for a significant portion of the domestic seafood supply.
How Fish Are Farmed
Fish farming typically begins in a hatchery, where eggs are carefully incubated and the juvenile fish (known as fry or fingerlings) are raised in controlled tanks or ponds. Once large enough, the young fish are transferred to open net pens in coastal waters or lakes, or to closed containment systems on land like raceways or recirculating tanks.
In open net pen systems, commonly used for salmon farming, the fish are contained in large underwater cages or enclosures. They are fed commercial fish feed and may be treated with antibiotics, pesticides, or other chemicals to control disease and parasites. When the fish reach market size, they are harvested from the pens.
Closed containment systems like raceways or recirculating aquaculture systems (RAS) aim to reduce environmental impacts by containing the fish on land in tanks or raceways. Water is treated and recirculated, allowing for better control of waste and prevention of fish escapes. However, these systems require significant infrastructure and energy inputs.

Potential Benefits of Farmed Fish
One of the primary advantages of farm-raised fish is a steady, reliable supply. As the Environment.co article notes, farmed fish help meet the growing demand for seafood while taking pressure off wild fish populations. Farmed fish are also generally more affordable for consumers than their wild-caught counterparts.
From a nutritional standpoint, farm-raised fish like salmon, trout, and tilapia are lean protein sources with lower levels of contaminants like mercury compared to some wild varieties. According to Colorado State University, fortified feed at some farms may even boost omega-3 fatty acid levels in farmed fish.
While concerns exist about some aquaculture practices, an increasing number of fish farms are adopting sustainable methods to reduce environmental impacts. Third-party certifications, covered later in this article, can help identify farms following best practices.
Environmental Concerns
While fish farming offers a sustainable protein source, it also raises several environmental concerns. One major issue is the discharge of waste from fish feces and uneaten feed, which can pollute surrounding waters with excess nutrients like nitrogen and phosphorus. This can lead to algal blooms and depleted oxygen levels, harming aquatic life (Sentient Media).
Fish farms also commonly use antibiotics, pesticides, and other chemicals to control disease and pests. These substances can accumulate in the environment and potentially impact non-target species. There are also concerns about the spread of pathogens and parasites from farmed fish to wild populations.
Coastal and offshore fish farms can damage sensitive habitats like mangroves, coral reefs, and seagrass beds through construction, pollution, and other activities. Escaped farmed fish may outcompete wild stocks for food and breeding grounds, potentially altering the natural gene pool.

Fish Health and Welfare
One of the major concerns surrounding fish farming is the potential for poor welfare and health conditions due to the crowded, confined environments in which the fish are raised. In open net pens and tanks, fish are kept at extremely high densities, leading to increased stress levels and vulnerability to disease and parasitic infections.
Sea lice infestations are a significant issue for farmed salmon, causing severe skin lesions, hemorrhaging, and compromised immune systems. The lice can also spread to nearby wild salmon populations. According to a study by the Animal Welfare Institute, “Salmon farms in Canada, Scotland, Norway, and other countries have been battling endemic sea lice infestations that can quickly spiral out of control.”
Overcrowding and poor water quality also facilitate the rapid spread of bacterial, viral, and fungal diseases among farmed fish. As noted by NOAA Fisheries, “Healthy farmed fish are advantageous because they require fewer treatments and grow better, but disease remains one of the biggest constraints to aquaculture’s sustainable growth and economic viability.”
Furthermore, the barren tank and cage environments provide little to no environmental enrichment or stimulation for the fish, which can lead to abnormal behaviors, increased aggression, and chronic stress. Research highlighted in Science Direct suggests that providing physical enrichment objects can help improve welfare by reducing stress and promoting natural behaviors.
Nutritional Comparison
While both wild and farmed fish are excellent sources of protein and various nutrients, there are some notable differences in their nutritional profiles. One of the main distinctions lies in their omega-3 fatty acid content. Wild fish tend to have higher levels of these beneficial fatty acids, particularly EPA and DHA, due to their natural diet of smaller fish and marine life rich in omega-3s. In contrast, farmed fish typically have lower omega-3 levels because their feed lacks the same diversity of marine sources.
Another area of concern is the potential for higher levels of contaminants, such as polychlorinated biphenyls (PCBs) and dioxins, in some farmed fish species. These contaminants can accumulate in the feed and environment of fish farms, leading to higher concentrations in the fish themselves. However, it’s important to note that strict regulations and monitoring help mitigate these risks, and levels of contaminants can vary widely depending on the specific farming practices and location.

Certifications and Regulations
As concerns over the environmental and social impacts of aquaculture have grown, various third-party certification programs have emerged to promote responsible farming practices. Two of the most prominent certifications are the Aquaculture Stewardship Council (ASC) and Best Aquaculture Practices (BAP).
The ASC sets standards for over 15 fish species, covering aspects like water quality, fish health, feed sourcing, and social responsibility. Farms that meet ASC requirements can market their products with the ASC eco-label. Similarly, the BAP certification covers environmental and social accountability, food safety, and traceability throughout the aquaculture supply chain.
Regulations and oversight for aquaculture vary by region and country. In the United States, the Food and Drug Administration oversees fish farm food safety, while environmental regulations fall under agencies like the Environmental Protection Agency. The European Union has detailed guidelines for aquaculture under the Common Fisheries Policy. Many other nations are working to develop comprehensive policies as the industry expands globally.
Open vs Closed Systems
A key distinction in aquaculture is whether fish are raised in open or closed systems. Open-net pens allow free exchange of water, waste, chemicals, and potential pathogens between the farm and surrounding environment. This can lead to pollution issues and spread of diseases to wild fish populations if pathogens or parasites are present. There is also a risk of farmed fish escaping and interbreeding with wild stocks.
In contrast, closed containment systems are self-contained with no direct exchange with the natural environment. These can be land-based recirculating tanks or closed pens in the ocean. Closed systems allow for better control of water quality, disease prevention, and waste management. They prevent fish escapes and minimize impacts on surrounding ecosystems. However, closed systems have higher operating costs and technological requirements.
From an environmental and fish welfare perspective, closed containment aquaculture is generally considered more sustainable than open net pens. Closed systems allow fish to stay longer away from open waters, preventing sea lice infestations, disease transfer, and escapes that can harm wild fish stocks. The contained environment also facilitates better monitoring and control of water quality, feed inputs, and waste outputs.
Healthiest Farmed Options
When it comes to choosing the healthiest farmed fish options, there are a few standouts to consider:
Salmon: Look for farmed Atlantic salmon that is raised in recirculating aquaculture systems (RAS) or other enclosed environments. These practices help reduce environmental impacts. Salmon farmed in the U.S. and Canada tend to be more sustainable choices. Avoid imported farmed salmon when possible.
Tilapia: Farmed tilapia from the United States is a lean, affordable option. Look for tilapia raised in indoor recirculating tanks, which is more environmentally friendly than open net pens. Avoid imported tilapia from Asia due to potential contamination concerns.
Shellfish: Farmed mussels, oysters, and clams can be sustainable choices when farmed in ways that don’t damage habitats. Look for options farmed in the U.S. or Canada.
Trout: Freshwater species like rainbow trout farmed in closed-containment systems in the U.S. are a healthy, eco-friendly option. Avoid imported trout when possible.
Consumer Tips
When shopping for farm-raised fish, there are several things to keep in mind to make the most sustainable and healthful choices:
Look for domestic sources when possible. Fish farmed in the United States is generally subject to stricter regulations than imported varieties. According to the University of Washington Sustainable Fisheries, choosing seafood from the USA or other well-managed regions is a good first step.
Read labels carefully. Look for certifications from groups like the Aquaculture Stewardship Council (ASC) or Best Aquaculture Practices (BAP), which have standards for environmentally and socially responsible aquaculture. As the Natural Resources Defense Council notes, these eco-labels can help identify more sustainable farmed fish.
Ask questions at the seafood counter or do research ahead of time to find suppliers using closed containment or recirculating aquaculture systems, which are generally more environmentally friendly than open net pens. The Marine Conservation Society also recommends asking about the feed used and any antibiotics or pesticides.
The Future of Aquaculture
As the global population continues to grow and demand for seafood rises, aquaculture is poised to play a pivotal role in addressing food security concerns. However, for the industry to be truly sustainable, innovative solutions are needed to mitigate environmental impacts and enhance fish welfare.
One promising development is the rise of land-based closed-containment systems, which allow for greater control over water quality, waste management, and disease prevention. These facilities can be located closer to major consumer markets, reducing transportation emissions and ensuring fresher products. Offshore aquaculture operations, situated in deeper waters further from shore, also offer potential benefits by minimizing coastal pollution and conflicts with other marine activities.
Advances in feed formulations, breeding techniques, and monitoring technologies are also contributing to more efficient and environmentally friendly aquaculture practices. For example, plant-based feed ingredients and selective breeding programs can help reduce the industry’s reliance on wild-caught fish for feed and improve the nutritional profile of farmed seafood. Real-time monitoring systems can optimize feeding regimes, detect diseases early, and minimize waste output.
As aquaculture continues to evolve and innovate, it holds great promise in complementing sustainable wild-catch fisheries to meet the world’s growing appetite for seafood in an environmentally responsible manner. However, ongoing research, investment, and collaboration between industry, policymakers, and environmental groups will be crucial to realizing aquaculture’s full potential as a sustainable food production system.